Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
UBA52P62987 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 GGT3P-204ENST00000453783 1664 ntBASIC13.68□□□□□ -0.22
UBA52P62987 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 AC126335.2-201ENST00000623362 4637 ntBASIC13.68□□□□□ -0.22
UBA52P62987 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.68□□□□□ -0.22
UBA52P62987 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBA52P62987 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
UBA52P62987 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 AC232323.1-201ENST00000540724 2099 ntBASIC13.67□□□□□ -0.22
UBA52P62987 REXO1L5P-201ENST00000622260 2098 ntBASIC13.67□□□□□ -0.22
UBA52P62987 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 AL671277.1-201ENST00000429656 993 ntBASIC13.67□□□□□ -0.22
UBA52P62987 AC005237.2-201ENST00000434368 219 ntBASIC13.67□□□□□ -0.22
UBA52P62987 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 SPDYE11-202ENST00000450699 704 ntBASIC13.67□□□□□ -0.22
UBA52P62987 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.67□□□□□ -0.22
UBA52P62987 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.67□□□□□ -0.22
UBA52P62987 SPDYE9P-201ENST00000570642 692 ntBASIC13.67□□□□□ -0.22
UBA52P62987 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.67□□□□□ -0.22
UBA52P62987 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.67□□□□□ -0.22
UBA52P62987 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.67□□□□□ -0.22
UBA52P62987 SPDYE10P-202ENST00000612005 668 ntBASIC13.67□□□□□ -0.22
UBA52P62987 SPDYE8P-202ENST00000612377 668 ntBASIC13.67□□□□□ -0.22
UBA52P62987 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.67□□□□□ -0.22
UBA52P62987 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UBA52P62987 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UBA52P62987 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UBA52P62987 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.67□□□□□ -0.22
UBA52P62987 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.67□□□□□ -0.22
UBA52P62987 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBA52P62987 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBA52P62987 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 AL135999.2-201ENST00000622438 1686 ntBASIC13.66□□□□□ -0.22
UBA52P62987 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
UBA52P62987 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.66□□□□□ -0.22
UBA52P62987 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBA52P62987 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms