Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.06□□□□□ -0.96
Cks1bP61025 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Gm25287-201ENSMUST00000103846 110 ntBASIC9.06□□□□□ -0.96
Cks1bP61025 Gm22918-201ENSMUST00000103855 110 ntBASIC9.06□□□□□ -0.96
Cks1bP61025 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.06□□□□□ -0.96
Cks1bP61025 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Cks1bP61025 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Cks1bP61025 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Gm21470-201ENSMUST00000187680 696 ntBASIC9.06□□□□□ -0.96
Cks1bP61025 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.06□□□□□ -0.96
Cks1bP61025 Gm5425-201ENSMUST00000214125 459 ntBASIC9.06□□□□□ -0.96
Cks1bP61025 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.06□□□□□ -0.96
Cks1bP61025 Dupd1-202ENSMUST00000224735 548 ntBASIC9.06□□□□□ -0.96
Cks1bP61025 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Cks1bP61025 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cks1bP61025 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cks1bP61025 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cks1bP61025 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.05□□□□□ -0.96
Cks1bP61025 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Cks1bP61025 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.05□□□□□ -0.96
Cks1bP61025 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.05□□□□□ -0.96
Cks1bP61025 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Gm24158-201ENSMUST00000175263 71 ntBASIC9.05□□□□□ -0.96
Cks1bP61025 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Cks1bP61025 Gm8927-201ENSMUST00000181978 981 ntBASIC9.05□□□□□ -0.96
Cks1bP61025 Gm4804-201ENSMUST00000182234 999 ntBASIC9.05□□□□□ -0.96
Cks1bP61025 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.05□□□□□ -0.96
Cks1bP61025 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Gm3222-201ENSMUST00000071282 990 ntBASIC9.05□□□□□ -0.96
Cks1bP61025 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1bP61025 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.05□□□□□ -0.96
Cks1bP61025 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms