Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AC131009.4-201ENST00000624048 1740 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AC008677.1-201ENST00000519230 1561 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AL450487.1-201ENST00000426799 995 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 RNF126P1-202ENST00000569893 925 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AL353801.3-201ENST00000609898 542 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AC112693.3-201ENST00000624819 1983 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 FGD5P1-202ENST00000614866 2498 ntBASIC12.32□□□□□ -0.44
ERVFC1-1P60608 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 ATP5G2P1-201ENST00000433580 426 ntBASIC12.31□□□□□ -0.44
ERVFC1-1P60608 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 PRELID1P1-202ENST00000567272 903 ntBASIC12.31□□□□□ -0.44
ERVFC1-1P60608 AC011498.5-201ENST00000592027 486 ntBASIC12.31□□□□□ -0.44
ERVFC1-1P60608 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 U82695.1-201ENST00000635752 1889 ntBASIC12.31□□□□□ -0.44
ERVFC1-1P60608 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ERVFC1-1P60608 MBLAC2-202ENST00000514906 1936 ntBASIC12.31□□□□□ -0.44
ERVFC1-1P60608 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms