Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 AC133539.2-201ENST00000604757 467 ntBASIC12.32□□□□□ -0.44
CD28P10747 AL391069.4-201ENST00000609583 481 ntBASIC12.32□□□□□ -0.44
CD28P10747 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.32□□□□□ -0.44
CD28P10747 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.32□□□□□ -0.44
CD28P10747 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 AP001282.1-201ENST00000531301 1499 ntBASIC12.32□□□□□ -0.44
CD28P10747 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CD28P10747 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD28P10747 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.32□□□□□ -0.44
CD28P10747 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 AC046158.3-201ENST00000624947 2558 ntBASIC12.31□□□□□ -0.44
CD28P10747 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 KRT8P22-201ENST00000562317 1415 ntBASIC12.31□□□□□ -0.44
CD28P10747 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.31□□□□□ -0.44
CD28P10747 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.31□□□□□ -0.44
CD28P10747 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
CD28P10747 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.31□□□□□ -0.44
CD28P10747 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.31□□□□□ -0.44
CD28P10747 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.31□□□□□ -0.44
CD28P10747 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 AC015936.2-201ENST00000593177 259 ntBASIC12.31□□□□□ -0.44
CD28P10747 CU634019.7-201ENST00000624153 1185 ntBASIC12.31□□□□□ -0.44
CD28P10747 FP236241.2-201ENST00000624906 1185 ntBASIC12.31□□□□□ -0.44
CD28P10747 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 PCDH8P1-201ENST00000428983 2773 ntBASIC12.31□□□□□ -0.44
CD28P10747 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.31□□□□□ -0.44
CD28P10747 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD28P10747 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD28P10747 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD28P10747 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 REXO1L1P-202ENST00000608646 1974 ntBASIC12.3□□□□□ -0.44
CD28P10747 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
CD28P10747 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms