Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Syn1O88935 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.04□□□□□ -0.32
Syn1O88935 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Syn1O88935 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.03□□□□□ -0.32
Syn1O88935 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Gm12628-201ENSMUST00000122193 382 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Syn1O88935 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.03□□□□□ -0.32
Syn1O88935 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Syn1O88935 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Gm9463-201ENSMUST00000206707 601 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Gm19187-201ENSMUST00000206781 892 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.03□□□□□ -0.32
Syn1O88935 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.03□□□□□ -0.32
Syn1O88935 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.03□□□□□ -0.32
Syn1O88935 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Syn1O88935 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.03□□□□□ -0.32
Syn1O88935 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Syn1O88935 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.03□□□□□ -0.32
Syn1O88935 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Syn1O88935 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Syn1O88935 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.03□□□□□ -0.32
Syn1O88935 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.03□□□□□ -0.32
Syn1O88935 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.02□□□□□ -0.32
Syn1O88935 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.02□□□□□ -0.32
Syn1O88935 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.02□□□□□ -0.32
Syn1O88935 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Syn1O88935 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
Syn1O88935 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Syn1O88935 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Syn1O88935 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.02□□□□□ -0.33
Syn1O88935 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.02□□□□□ -0.33
Syn1O88935 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.02□□□□□ -0.33
Syn1O88935 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.02□□□□□ -0.33
Syn1O88935 Gm15881-201ENSMUST00000148792 942 ntBASIC13.02□□□□□ -0.33
Syn1O88935 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.02□□□□□ -0.33
Syn1O88935 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.02□□□□□ -0.33
Syn1O88935 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.02□□□□□ -0.33
Syn1O88935 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.02□□□□□ -0.33
Syn1O88935 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.02□□□□□ -0.33
Syn1O88935 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.02□□□□□ -0.33
Syn1O88935 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Syn1O88935 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms