Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ATP2A1O14983 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ATP2A1O14983 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.92■□□□□ 0.46
ATP2A1O14983 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.92■□□□□ 0.46
ATP2A1O14983 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.92■□□□□ 0.46
ATP2A1O14983 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATP2A1O14983 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ATP2A1O14983 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.92■□□□□ 0.46
ATP2A1O14983 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP2A1O14983 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
ATP2A1O14983 TUBB1P2-201ENST00000422712 1306 ntBASIC17.92■□□□□ 0.46
ATP2A1O14983 TUBB1P1-201ENST00000503144 1300 ntBASIC17.92■□□□□ 0.46
ATP2A1O14983 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ATP2A1O14983 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.92■□□□□ 0.46
ATP2A1O14983 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ATP2A1O14983 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP2A1O14983 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP2A1O14983 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 TNRC18P3-201ENST00000441896 2691 ntBASIC17.91■□□□□ 0.46
ATP2A1O14983 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.91■□□□□ 0.46
ATP2A1O14983 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.91■□□□□ 0.46
ATP2A1O14983 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP2A1O14983 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 AC079316.1-201ENST00000548397 411 ntBASIC17.91■□□□□ 0.46
ATP2A1O14983 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.91■□□□□ 0.46
ATP2A1O14983 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP2A1O14983 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A1O14983 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A1O14983 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ATP2A1O14983 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A1O14983 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A1O14983 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 ACTBP11-201ENST00000436287 1126 ntBASIC17.9■□□□□ 0.46
ATP2A1O14983 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A1O14983 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A1O14983 KRT90P-201ENST00000549264 1064 ntBASIC17.9■□□□□ 0.46
ATP2A1O14983 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A1O14983 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A1O14983 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A1O14983 AP005019.2-201ENST00000615104 511 ntBASIC17.9■□□□□ 0.46
ATP2A1O14983 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ATP2A1O14983 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A1O14983 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A1O14983 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A1O14983 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms