Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.39□□□□□ -0.75
Trim63Q38HM4 AA414768-201ENSMUST00000121924 1257 ntBASIC10.39□□□□□ -0.75
Trim63Q38HM4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gm6345-202ENSMUST00000180900 204 ntBASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.39□□□□□ -0.75
Trim63Q38HM4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.39□□□□□ -0.75
Trim63Q38HM4 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim63Q38HM4 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.38□□□□□ -0.75
Trim63Q38HM4 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Gm45841-201ENSMUST00000207700 164 ntBASIC10.38□□□□□ -0.75
Trim63Q38HM4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.38□□□□□ -0.75
Trim63Q38HM4 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.38□□□□□ -0.75
Trim63Q38HM4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trim63Q38HM4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms