Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rnf111Q99ML9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf111Q99ML9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf111Q99ML9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.36■□□□□ 0.85
Rnf111Q99ML9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf111Q99ML9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf111Q99ML9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf111Q99ML9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf111Q99ML9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf111Q99ML9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf111Q99ML9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf111Q99ML9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf111Q99ML9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf111Q99ML9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf111Q99ML9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf111Q99ML9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rnf111Q99ML9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf111Q99ML9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf111Q99ML9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf111Q99ML9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf111Q99ML9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.32■□□□□ 0.84
Rnf111Q99ML9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf111Q99ML9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf111Q99ML9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf111Q99ML9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf111Q99ML9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf111Q99ML9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf111Q99ML9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf111Q99ML9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf111Q99ML9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf111Q99ML9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf111Q99ML9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf111Q99ML9 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.29■□□□□ 0.84
Rnf111Q99ML9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf111Q99ML9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf111Q99ML9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf111Q99ML9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf111Q99ML9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf111Q99ML9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf111Q99ML9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf111Q99ML9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf111Q99ML9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf111Q99ML9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.27■□□□□ 0.84
Rnf111Q99ML9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf111Q99ML9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf111Q99ML9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rnf111Q99ML9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf111Q99ML9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf111Q99ML9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf111Q99ML9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.26■□□□□ 0.83
Rnf111Q99ML9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf111Q99ML9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Rnf111Q99ML9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf111Q99ML9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.25■□□□□ 0.83
Rnf111Q99ML9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf111Q99ML9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf111Q99ML9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf111Q99ML9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf111Q99ML9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms