Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hbp1Q8R316 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hbp1Q8R316 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hbp1Q8R316 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hbp1Q8R316 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hbp1Q8R316 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hbp1Q8R316 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.86■□□□□ 0.93
Hbp1Q8R316 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hbp1Q8R316 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.85■□□□□ 0.93
Hbp1Q8R316 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hbp1Q8R316 Gm12922-201ENSMUST00000120626 809 ntBASIC20.85■□□□□ 0.93
Hbp1Q8R316 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hbp1Q8R316 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Hbp1Q8R316 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hbp1Q8R316 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.85■□□□□ 0.93
Hbp1Q8R316 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hbp1Q8R316 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hbp1Q8R316 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hbp1Q8R316 Gm15039-201ENSMUST00000118914 875 ntBASIC20.84■□□□□ 0.93
Hbp1Q8R316 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hbp1Q8R316 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.84■□□□□ 0.93
Hbp1Q8R316 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hbp1Q8R316 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.84■□□□□ 0.93
Hbp1Q8R316 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.84■□□□□ 0.93
Hbp1Q8R316 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hbp1Q8R316 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hbp1Q8R316 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hbp1Q8R316 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hbp1Q8R316 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hbp1Q8R316 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hbp1Q8R316 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hbp1Q8R316 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hbp1Q8R316 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.82■□□□□ 0.92
Hbp1Q8R316 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hbp1Q8R316 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hbp1Q8R316 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hbp1Q8R316 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Hbp1Q8R316 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hbp1Q8R316 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hbp1Q8R316 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.81■□□□□ 0.92
Hbp1Q8R316 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.81■□□□□ 0.92
Hbp1Q8R316 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Hbp1Q8R316 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hbp1Q8R316 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hbp1Q8R316 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hbp1Q8R316 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.79■□□□□ 0.92
Hbp1Q8R316 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hbp1Q8R316 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.78■□□□□ 0.92
Hbp1Q8R316 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hbp1Q8R316 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.77■□□□□ 0.92
Hbp1Q8R316 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hbp1Q8R316 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hbp1Q8R316 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Hbp1Q8R316 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hbp1Q8R316 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hbp1Q8R316 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hbp1Q8R316 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hbp1Q8R316 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hbp1Q8R316 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Hbp1Q8R316 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.75■□□□□ 0.91
Hbp1Q8R316 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.75■□□□□ 0.91
Hbp1Q8R316 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hbp1Q8R316 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Hbp1Q8R316 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.74■□□□□ 0.91
Hbp1Q8R316 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.74■□□□□ 0.91
Hbp1Q8R316 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.74■□□□□ 0.91
Hbp1Q8R316 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.74■□□□□ 0.91
Hbp1Q8R316 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Hbp1Q8R316 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hbp1Q8R316 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms