Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Atf7Q8R0S1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Atf7Q8R0S1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Atf7Q8R0S1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.95■■□□□ 1.58
Atf7Q8R0S1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
Atf7Q8R0S1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Atf7Q8R0S1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Atf7Q8R0S1 Gm13238-201ENSMUST00000117655 780 ntBASIC24.94■■□□□ 1.58
Atf7Q8R0S1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
Atf7Q8R0S1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Atf7Q8R0S1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Atf7Q8R0S1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Atf7Q8R0S1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Atf7Q8R0S1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Atf7Q8R0S1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Atf7Q8R0S1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Atf7Q8R0S1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Atf7Q8R0S1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Atf7Q8R0S1 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.92■■□□□ 1.58
Atf7Q8R0S1 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.92■■□□□ 1.58
Atf7Q8R0S1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.92■■□□□ 1.58
Atf7Q8R0S1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.92■■□□□ 1.58
Atf7Q8R0S1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Atf7Q8R0S1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Atf7Q8R0S1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atf7Q8R0S1 Gm43566-201ENSMUST00000196851 808 ntBASIC24.91■■□□□ 1.58
Atf7Q8R0S1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atf7Q8R0S1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Atf7Q8R0S1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Atf7Q8R0S1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
Atf7Q8R0S1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Atf7Q8R0S1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
Atf7Q8R0S1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Atf7Q8R0S1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.87■■□□□ 1.57
Atf7Q8R0S1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Atf7Q8R0S1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Atf7Q8R0S1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Atf7Q8R0S1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.87■■□□□ 1.57
Atf7Q8R0S1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atf7Q8R0S1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atf7Q8R0S1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atf7Q8R0S1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Atf7Q8R0S1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.86■■□□□ 1.57
Atf7Q8R0S1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atf7Q8R0S1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atf7Q8R0S1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Atf7Q8R0S1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Atf7Q8R0S1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Atf7Q8R0S1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.85■■□□□ 1.57
Atf7Q8R0S1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Atf7Q8R0S1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Atf7Q8R0S1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Atf7Q8R0S1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.84■■□□□ 1.57
Atf7Q8R0S1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Atf7Q8R0S1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Atf7Q8R0S1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Atf7Q8R0S1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Atf7Q8R0S1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Atf7Q8R0S1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atf7Q8R0S1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Atf7Q8R0S1 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.82■■□□□ 1.56
Atf7Q8R0S1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Atf7Q8R0S1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.82■■□□□ 1.56
Atf7Q8R0S1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atf7Q8R0S1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atf7Q8R0S1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atf7Q8R0S1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atf7Q8R0S1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atf7Q8R0S1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atf7Q8R0S1 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.8■■□□□ 1.56
Atf7Q8R0S1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.8■■□□□ 1.56
Atf7Q8R0S1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Atf7Q8R0S1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.8■■□□□ 1.56
Atf7Q8R0S1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Atf7Q8R0S1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Atf7Q8R0S1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
Atf7Q8R0S1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Atf7Q8R0S1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 221.5 ms