Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdlim5Q8CI51 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim5Q8CI51 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim5Q8CI51 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim5Q8CI51 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim5Q8CI51 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim5Q8CI51 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Pdlim5Q8CI51 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim5Q8CI51 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim5Q8CI51 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim5Q8CI51 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim5Q8CI51 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim5Q8CI51 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pdlim5Q8CI51 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Pdlim5Q8CI51 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim5Q8CI51 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim5Q8CI51 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim5Q8CI51 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim5Q8CI51 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim5Q8CI51 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim5Q8CI51 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim5Q8CI51 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.33■□□□□ 0.68
Pdlim5Q8CI51 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pdlim5Q8CI51 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim5Q8CI51 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pdlim5Q8CI51 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim5Q8CI51 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim5Q8CI51 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim5Q8CI51 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Pdlim5Q8CI51 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim5Q8CI51 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim5Q8CI51 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pdlim5Q8CI51 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim5Q8CI51 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim5Q8CI51 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim5Q8CI51 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pdlim5Q8CI51 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim5Q8CI51 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim5Q8CI51 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim5Q8CI51 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim5Q8CI51 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pdlim5Q8CI51 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim5Q8CI51 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.28■□□□□ 0.68
Pdlim5Q8CI51 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdlim5Q8CI51 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim5Q8CI51 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pdlim5Q8CI51 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim5Q8CI51 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pdlim5Q8CI51 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim5Q8CI51 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdlim5Q8CI51 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdlim5Q8CI51 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim5Q8CI51 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim5Q8CI51 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim5Q8CI51 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim5Q8CI51 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim5Q8CI51 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim5Q8CI51 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim5Q8CI51 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim5Q8CI51 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 405.1 ms