Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm4Q8BKA3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Srrm4Q8BKA3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Srrm4Q8BKA3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Srrm4Q8BKA3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.24■□□□□ 0.51
Srrm4Q8BKA3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Srrm4Q8BKA3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Srrm4Q8BKA3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.22■□□□□ 0.51
Srrm4Q8BKA3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm4Q8BKA3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.22■□□□□ 0.51
Srrm4Q8BKA3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm4Q8BKA3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm4Q8BKA3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Srrm4Q8BKA3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Gm10232-201ENSMUST00000089221 720 ntBASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Srrm4Q8BKA3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Srrm4Q8BKA3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Srrm4Q8BKA3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm4Q8BKA3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm4Q8BKA3 Gm15820-201ENSMUST00000201566 728 ntBASIC18.2■□□□□ 0.5
Srrm4Q8BKA3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm4Q8BKA3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm4Q8BKA3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Srrm4Q8BKA3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Srrm4Q8BKA3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm4Q8BKA3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm4Q8BKA3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm4Q8BKA3 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.19■□□□□ 0.5
Srrm4Q8BKA3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Srrm4Q8BKA3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Srrm4Q8BKA3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm4Q8BKA3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm4Q8BKA3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm4Q8BKA3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm4Q8BKA3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm4Q8BKA3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm4Q8BKA3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Srrm4Q8BKA3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm4Q8BKA3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm4Q8BKA3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm4Q8BKA3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm4Q8BKA3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm4Q8BKA3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Srrm4Q8BKA3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm4Q8BKA3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms