Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn3bQ8BHK2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn3bQ8BHK2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn3bQ8BHK2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scn3bQ8BHK2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn3bQ8BHK2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn3bQ8BHK2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn3bQ8BHK2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn3bQ8BHK2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn3bQ8BHK2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn3bQ8BHK2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn3bQ8BHK2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn3bQ8BHK2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Scn3bQ8BHK2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn3bQ8BHK2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn3bQ8BHK2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn3bQ8BHK2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn3bQ8BHK2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn3bQ8BHK2 Gm45364-201ENSMUST00000210883 159 ntBASIC19.47■□□□□ 0.71
Scn3bQ8BHK2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scn3bQ8BHK2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scn3bQ8BHK2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn3bQ8BHK2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn3bQ8BHK2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn3bQ8BHK2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn3bQ8BHK2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn3bQ8BHK2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn3bQ8BHK2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn3bQ8BHK2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn3bQ8BHK2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn3bQ8BHK2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn3bQ8BHK2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.45■□□□□ 0.7
Scn3bQ8BHK2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.45■□□□□ 0.7
Scn3bQ8BHK2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn3bQ8BHK2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn3bQ8BHK2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn3bQ8BHK2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scn3bQ8BHK2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn3bQ8BHK2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn3bQ8BHK2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn3bQ8BHK2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn3bQ8BHK2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn3bQ8BHK2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3bQ8BHK2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3bQ8BHK2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3bQ8BHK2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3bQ8BHK2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn3bQ8BHK2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scn3bQ8BHK2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Scn3bQ8BHK2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3bQ8BHK2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3bQ8BHK2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.4■□□□□ 0.7
Scn3bQ8BHK2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3bQ8BHK2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3bQ8BHK2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3bQ8BHK2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn3bQ8BHK2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3bQ8BHK2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3bQ8BHK2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn3bQ8BHK2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.39■□□□□ 0.69
Scn3bQ8BHK2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn3bQ8BHK2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Scn3bQ8BHK2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.39■□□□□ 0.69
Scn3bQ8BHK2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn3bQ8BHK2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.39■□□□□ 0.69
Scn3bQ8BHK2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3bQ8BHK2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Scn3bQ8BHK2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3bQ8BHK2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3bQ8BHK2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3bQ8BHK2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3bQ8BHK2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn3bQ8BHK2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms