Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.68■□□□□ 0.74
ParpbpQ6IRT3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.67■□□□□ 0.74
ParpbpQ6IRT3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ParpbpQ6IRT3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ParpbpQ6IRT3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ParpbpQ6IRT3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Gm13238-201ENSMUST00000117655 780 ntBASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ParpbpQ6IRT3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ParpbpQ6IRT3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ParpbpQ6IRT3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.65■□□□□ 0.74
ParpbpQ6IRT3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.65■□□□□ 0.74
ParpbpQ6IRT3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ParpbpQ6IRT3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ParpbpQ6IRT3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ParpbpQ6IRT3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ParpbpQ6IRT3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ParpbpQ6IRT3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.64■□□□□ 0.73
ParpbpQ6IRT3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ParpbpQ6IRT3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ParpbpQ6IRT3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ParpbpQ6IRT3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ParpbpQ6IRT3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 Gm43566-201ENSMUST00000196851 808 ntBASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ParpbpQ6IRT3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
ParpbpQ6IRT3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ParpbpQ6IRT3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
ParpbpQ6IRT3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ParpbpQ6IRT3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ParpbpQ6IRT3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ParpbpQ6IRT3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ParpbpQ6IRT3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ParpbpQ6IRT3 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.58■□□□□ 0.72
ParpbpQ6IRT3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
ParpbpQ6IRT3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.58■□□□□ 0.72
ParpbpQ6IRT3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ParpbpQ6IRT3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ParpbpQ6IRT3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ParpbpQ6IRT3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ParpbpQ6IRT3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ParpbpQ6IRT3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ParpbpQ6IRT3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ParpbpQ6IRT3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms