Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h3bP84228 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h3bP84228 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h3bP84228 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h3bP84228 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Hist1h3bP84228 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Hist1h3bP84228 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h3bP84228 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h3bP84228 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h3bP84228 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.45■□□□□ 0.54
Hist1h3bP84228 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h3bP84228 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hist1h3bP84228 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h3bP84228 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hist1h3bP84228 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hist1h3bP84228 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.44■□□□□ 0.54
Hist1h3bP84228 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.44■□□□□ 0.54
Hist1h3bP84228 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h3bP84228 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.43■□□□□ 0.54
Hist1h3bP84228 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h3bP84228 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hist1h3bP84228 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.43■□□□□ 0.54
Hist1h3bP84228 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h3bP84228 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h3bP84228 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h3bP84228 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h3bP84228 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h3bP84228 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.42■□□□□ 0.54
Hist1h3bP84228 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hist1h3bP84228 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h3bP84228 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h3bP84228 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.41■□□□□ 0.54
Hist1h3bP84228 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hist1h3bP84228 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h3bP84228 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h3bP84228 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h3bP84228 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h3bP84228 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.4■□□□□ 0.54
Hist1h3bP84228 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h3bP84228 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hist1h3bP84228 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h3bP84228 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Hist1h3bP84228 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Hist1h3bP84228 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.39■□□□□ 0.53
Hist1h3bP84228 Gm45444-201ENSMUST00000211394 898 ntBASIC18.39■□□□□ 0.53
Hist1h3bP84228 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h3bP84228 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3bP84228 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3bP84228 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3bP84228 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.38■□□□□ 0.53
Hist1h3bP84228 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Hist1h3bP84228 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3bP84228 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hist1h3bP84228 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3bP84228 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.37■□□□□ 0.53
Hist1h3bP84228 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3bP84228 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.37■□□□□ 0.53
Hist1h3bP84228 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3bP84228 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Hist1h3bP84228 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3bP84228 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3bP84228 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Hist1h3bP84228 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3bP84228 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.37■□□□□ 0.53
Hist1h3bP84228 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hist1h3bP84228 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms