Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SgcdP82347 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SgcdP82347 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcdP82347 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SgcdP82347 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcdP82347 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcdP82347 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcdP82347 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcdP82347 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcdP82347 Golph3-202ENSMUST00000226517 2359 ntBASIC19.27■□□□□ 0.68
SgcdP82347 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcdP82347 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcdP82347 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Gm45364-201ENSMUST00000210883 159 ntBASIC19.26■□□□□ 0.67
SgcdP82347 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SgcdP82347 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.26■□□□□ 0.67
SgcdP82347 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcdP82347 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SgcdP82347 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SgcdP82347 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcdP82347 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcdP82347 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SgcdP82347 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SgcdP82347 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.25■□□□□ 0.67
SgcdP82347 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcdP82347 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcdP82347 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcdP82347 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcdP82347 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.24■□□□□ 0.67
SgcdP82347 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SgcdP82347 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcdP82347 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SgcdP82347 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.24■□□□□ 0.67
SgcdP82347 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.24■□□□□ 0.67
SgcdP82347 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcdP82347 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.24■□□□□ 0.67
SgcdP82347 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.24■□□□□ 0.67
SgcdP82347 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SgcdP82347 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcdP82347 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SgcdP82347 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcdP82347 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcdP82347 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcdP82347 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcdP82347 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SgcdP82347 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SgcdP82347 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SgcdP82347 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.22■□□□□ 0.67
SgcdP82347 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.22■□□□□ 0.67
SgcdP82347 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SgcdP82347 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.22■□□□□ 0.67
SgcdP82347 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SgcdP82347 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SgcdP82347 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcdP82347 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcdP82347 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcdP82347 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcdP82347 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SgcdP82347 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcdP82347 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SgcdP82347 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcdP82347 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.19■□□□□ 0.66
SgcdP82347 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcdP82347 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SgcdP82347 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcdP82347 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.18■□□□□ 0.66
SgcdP82347 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.18■□□□□ 0.66
SgcdP82347 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.18■□□□□ 0.66
SgcdP82347 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcdP82347 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcdP82347 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcdP82347 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SgcdP82347 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SgcdP82347 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.18■□□□□ 0.66
SgcdP82347 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcdP82347 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SgcdP82347 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SgcdP82347 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SgcdP82347 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms