Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GdnfP48540 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GdnfP48540 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GdnfP48540 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GdnfP48540 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.28■□□□□ 0.52
GdnfP48540 Gm14523-201ENSMUST00000117260 558 ntBASIC18.28■□□□□ 0.52
GdnfP48540 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GdnfP48540 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
GdnfP48540 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GdnfP48540 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
GdnfP48540 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GdnfP48540 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.27■□□□□ 0.52
GdnfP48540 Gm12366-201ENSMUST00000121722 873 ntBASIC18.27■□□□□ 0.52
GdnfP48540 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.27■□□□□ 0.52
GdnfP48540 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GdnfP48540 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.27■□□□□ 0.52
GdnfP48540 Gm5786-201ENSMUST00000085368 882 ntBASIC18.27■□□□□ 0.52
GdnfP48540 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GdnfP48540 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.27■□□□□ 0.52
GdnfP48540 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GdnfP48540 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GdnfP48540 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GdnfP48540 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GdnfP48540 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GdnfP48540 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
GdnfP48540 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.25■□□□□ 0.51
GdnfP48540 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.25■□□□□ 0.51
GdnfP48540 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
GdnfP48540 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.25■□□□□ 0.51
GdnfP48540 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GdnfP48540 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GdnfP48540 Gm7332-201ENSMUST00000118351 454 ntBASIC18.24■□□□□ 0.51
GdnfP48540 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GdnfP48540 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GdnfP48540 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GdnfP48540 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GdnfP48540 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GdnfP48540 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GdnfP48540 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.23■□□□□ 0.51
GdnfP48540 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.23■□□□□ 0.51
GdnfP48540 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GdnfP48540 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GdnfP48540 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GdnfP48540 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GdnfP48540 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GdnfP48540 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GdnfP48540 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GdnfP48540 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GdnfP48540 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
GdnfP48540 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.21■□□□□ 0.51
GdnfP48540 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GdnfP48540 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GdnfP48540 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GdnfP48540 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GdnfP48540 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GdnfP48540 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GdnfP48540 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GdnfP48540 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GdnfP48540 Cap2-205ENSMUST00000225824 1634 ntBASIC18.2■□□□□ 0.5
GdnfP48540 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GdnfP48540 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.2■□□□□ 0.5
GdnfP48540 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GdnfP48540 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.2■□□□□ 0.5
GdnfP48540 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.2■□□□□ 0.5
GdnfP48540 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GdnfP48540 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
GdnfP48540 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GdnfP48540 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GdnfP48540 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GdnfP48540 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.18■□□□□ 0.5
GdnfP48540 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GdnfP48540 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GdnfP48540 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GdnfP48540 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms