Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
P04940 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.18■□□□□ 0.34
P04940 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04940 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
P04940 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04940 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.17■□□□□ 0.34
P04940 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04940 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
P04940 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04940 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04940 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04940 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04940 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04940 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.16■□□□□ 0.34
P04940 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
P04940 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04940 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.16■□□□□ 0.34
P04940 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04940 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04940 Gm13238-201ENSMUST00000117655 780 ntBASIC17.15■□□□□ 0.34
P04940 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04940 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04940 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04940 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
P04940 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04940 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04940 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04940 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04940 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.14■□□□□ 0.33
P04940 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.14■□□□□ 0.33
P04940 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04940 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04940 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.14■□□□□ 0.33
P04940 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04940 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04940 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04940 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.13■□□□□ 0.33
P04940 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04940 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.13■□□□□ 0.33
P04940 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
P04940 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04940 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04940 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04940 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04940 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P04940 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04940 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
P04940 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04940 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04940 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P04940 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P04940 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P04940 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04940 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04940 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.1■□□□□ 0.33
P04940 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04940 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.1■□□□□ 0.33
P04940 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04940 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04940 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.1■□□□□ 0.33
P04940 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04940 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04940 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04940 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04940 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04940 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P04940 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.09■□□□□ 0.33
P04940 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.09■□□□□ 0.33
P04940 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.09■□□□□ 0.33
P04940 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P04940 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04940 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04940 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04940 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P04940 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04940 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04940 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P04940 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04940 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
P04940 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04940 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
P04940 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04940 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04940 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.07■□□□□ 0.32
P04940 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04940 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04940 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04940 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04940 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
P04940 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04940 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04940 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms