Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Brs3O54798 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Brs3O54798 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brs3O54798 Gm7417-201ENSMUST00000192950 473 ntBASIC17.25■□□□□ 0.35
Brs3O54798 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.25■□□□□ 0.35
Brs3O54798 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Brs3O54798 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Brs3O54798 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brs3O54798 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.25■□□□□ 0.35
Brs3O54798 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brs3O54798 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Brs3O54798 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Brs3O54798 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Gm10399-202ENSMUST00000202768 748 ntBASIC17.24■□□□□ 0.35
Brs3O54798 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.24■□□□□ 0.35
Brs3O54798 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brs3O54798 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brs3O54798 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Brs3O54798 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.23■□□□□ 0.35
Brs3O54798 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.23■□□□□ 0.35
Brs3O54798 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brs3O54798 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.23■□□□□ 0.35
Brs3O54798 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brs3O54798 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brs3O54798 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.22■□□□□ 0.35
Brs3O54798 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.22■□□□□ 0.35
Brs3O54798 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brs3O54798 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Brs3O54798 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brs3O54798 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brs3O54798 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brs3O54798 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.21■□□□□ 0.35
Brs3O54798 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brs3O54798 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brs3O54798 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brs3O54798 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brs3O54798 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Brs3O54798 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Brs3O54798 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brs3O54798 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brs3O54798 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brs3O54798 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Brs3O54798 Gm40881-201ENSMUST00000223397 166 ntBASIC17.2■□□□□ 0.34
Brs3O54798 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brs3O54798 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brs3O54798 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.2■□□□□ 0.34
Brs3O54798 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brs3O54798 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brs3O54798 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brs3O54798 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.19■□□□□ 0.34
Brs3O54798 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brs3O54798 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Brs3O54798 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.19■□□□□ 0.34
Brs3O54798 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.19■□□□□ 0.34
Brs3O54798 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brs3O54798 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brs3O54798 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brs3O54798 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brs3O54798 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Brs3O54798 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Brs3O54798 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brs3O54798 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.18■□□□□ 0.34
Brs3O54798 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brs3O54798 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brs3O54798 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brs3O54798 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.17■□□□□ 0.34
Brs3O54798 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Brs3O54798 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brs3O54798 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brs3O54798 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Brs3O54798 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Brs3O54798 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brs3O54798 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brs3O54798 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brs3O54798 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brs3O54798 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brs3O54798 Notumos-201ENSMUST00000151998 2659 ntBASIC17.16■□□□□ 0.34
Brs3O54798 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brs3O54798 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.16■□□□□ 0.34
Brs3O54798 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms