Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Tnfrsf11bO08712 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11bO08712 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
Tnfrsf11bO08712 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11bO08712 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf11bO08712 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.37■■□□□ 1.01
Tnfrsf11bO08712 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tnfrsf11bO08712 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tnfrsf11bO08712 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11bO08712 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf11bO08712 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.35■■□□□ 1.01
Tnfrsf11bO08712 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf11bO08712 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf11bO08712 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf11bO08712 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf11bO08712 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.33■■□□□ 1.01
Tnfrsf11bO08712 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf11bO08712 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf11bO08712 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Tnfrsf11bO08712 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf11bO08712 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf11bO08712 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf11bO08712 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tnfrsf11bO08712 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf11bO08712 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Tnfrsf11bO08712 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf11bO08712 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf11bO08712 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf11bO08712 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf11bO08712 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Tnfrsf11bO08712 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf11bO08712 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf11bO08712 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf11bO08712 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.3■■□□□ 1
Tnfrsf11bO08712 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf11bO08712 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf11bO08712 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf11bO08712 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf11bO08712 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Tnfrsf11bO08712 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf11bO08712 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf11bO08712 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Tnfrsf11bO08712 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Tnfrsf11bO08712 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf11bO08712 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tnfrsf11bO08712 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf11bO08712 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf11bO08712 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf11bO08712 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
Tnfrsf11bO08712 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.27■■□□□ 1
Tnfrsf11bO08712 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tnfrsf11bO08712 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tnfrsf11bO08712 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Tnfrsf11bO08712 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.26■□□□□ 0.99
Tnfrsf11bO08712 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms