Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.4□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-4-dv7A0A075B6C2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Scarna2-201ENSMUST00000157560 414 ntBASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Gm16437-201ENSMUST00000025669 507 ntBASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms