Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-5A0A075B6B9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-5A0A075B6B9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-5A0A075B6B9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-5A0A075B6B9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6d-5A0A075B6B9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trav6d-5A0A075B6B9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6d-5A0A075B6B9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-5A0A075B6B9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-5A0A075B6B9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav6d-5A0A075B6B9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav6d-5A0A075B6B9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav6d-5A0A075B6B9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 Gm5987-201ENSMUST00000196433 1151 ntBASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 Gm44428-201ENSMUST00000204474 874 ntBASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-5A0A075B6B9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Gm8503-201ENSMUST00000118131 455 ntBASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-5A0A075B6B9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-5A0A075B6B9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-5A0A075B6B9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-5A0A075B6B9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6d-5A0A075B6B9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6d-5A0A075B6B9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trav6d-5A0A075B6B9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Trav6d-5A0A075B6B9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav6d-5A0A075B6B9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms