Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 TEX47-201ENST00000297203 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 ACTG1P4-201ENST00000425123 1122 ntBASIC18.9■□□□□ 0.62
RNF216Q9NWF9 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AL450344.3-201ENST00000430770 378 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 ACTG1P14-201ENST00000446382 1122 ntBASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AC009502.2-201ENST00000452903 766 ntBASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AP000563.1-201ENST00000490865 758 ntBASIC18.9■□□□□ 0.62
RNF216Q9NWF9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AP003049.1-201ENST00000529418 457 ntBASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 SNX6P1-201ENST00000601728 1224 ntBASIC18.9■□□□□ 0.62
RNF216Q9NWF9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF216Q9NWF9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
RNF216Q9NWF9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RNF216Q9NWF9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
RNF216Q9NWF9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.89■□□□□ 0.62
RNF216Q9NWF9 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC18.89■□□□□ 0.62
RNF216Q9NWF9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RNF216Q9NWF9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.89■□□□□ 0.62
RNF216Q9NWF9 CASC19-261ENST00000641853 1638 ntBASIC18.89■□□□□ 0.62
RNF216Q9NWF9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AP000542.1-201ENST00000448473 371 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AL031432.1-201ENST00000455902 988 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AC060788.1-201ENST00000521318 469 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AC006116.7-201ENST00000590141 756 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AP003485.2-201ENST00000623636 610 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AL078595.3-201ENST00000623815 1166 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 PCDHA1-201ENST00000378133 2726 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF216Q9NWF9 AC133963.1-201ENST00000504166 1679 ntBASIC18.89■□□□□ 0.61
RNF216Q9NWF9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms