Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC17.84■□□□□ 0.45
Usp47Q8BY87 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.84■□□□□ 0.45
Usp47Q8BY87 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp47Q8BY87 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.83■□□□□ 0.45
Usp47Q8BY87 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.83■□□□□ 0.45
Usp47Q8BY87 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp47Q8BY87 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 AC126444.1-201ENSMUST00000225938 1768 ntBASIC17.83■□□□□ 0.44
Usp47Q8BY87 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.83■□□□□ 0.44
Usp47Q8BY87 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp47Q8BY87 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 AC166344.1-202ENSMUST00000224139 234 ntBASIC17.82■□□□□ 0.44
Usp47Q8BY87 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 AC122197.2-201ENSMUST00000219196 1635 ntBASIC17.82■□□□□ 0.44
Usp47Q8BY87 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp47Q8BY87 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Gm12015-201ENSMUST00000117065 843 ntBASIC17.81■□□□□ 0.44
Usp47Q8BY87 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Gm25700-201ENSMUST00000177693 110 ntBASIC17.81■□□□□ 0.44
Usp47Q8BY87 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Gm45186-201ENSMUST00000206874 478 ntBASIC17.81■□□□□ 0.44
Usp47Q8BY87 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Usp47Q8BY87 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.81■□□□□ 0.44
Usp47Q8BY87 Gzmn-202ENSMUST00000225535 989 ntBASIC17.81■□□□□ 0.44
Usp47Q8BY87 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.81■□□□□ 0.44
Usp47Q8BY87 AC163667.3-201ENSMUST00000225774 222 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms