Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 COX20P1-201ENST00000366529 357 ntBASIC13.43□□□□□ -0.26
LRRK2Q5S007 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.43□□□□□ -0.26
LRRK2Q5S007 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRK2Q5S007 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 AC148477.4-201ENST00000613430 1793 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 AL157791.1-201ENST00000553667 1699 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 AP002490.2-201ENST00000524791 560 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 AL162426.1-201ENST00000624141 743 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 ACTBP7-201ENST00000418351 1124 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 AL391280.1-201ENST00000506969 1062 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 AC005632.3-201ENST00000605544 308 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 AC073911.3-201ENST00000624401 631 ntBASIC13.42□□□□□ -0.26
LRRK2Q5S007 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRK2Q5S007 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
LRRK2Q5S007 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 RPL7P35-201ENST00000446943 740 ntBASIC13.41□□□□□ -0.26
LRRK2Q5S007 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AC005052.1-201ENST00000625181 2492 ntBASIC13.41□□□□□ -0.26
LRRK2Q5S007 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 CTSL-202ENST00000342020 933 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms