Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Lrrfip1Q3UZ39 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lrrfip1Q3UZ39 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lrrfip1Q3UZ39 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lrrfip1Q3UZ39 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lrrfip1Q3UZ39 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.46□□□□□ -0.1
Lrrfip1Q3UZ39 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm23363-201ENSMUST00000175024 79 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm3890-201ENSMUST00000182416 207 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Gm43133-201ENSMUST00000197472 463 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lrrfip1Q3UZ39 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm18584-201ENSMUST00000203098 964 ntBASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm19309-201ENSMUST00000218295 205 ntBASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lrrfip1Q3UZ39 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrfip1Q3UZ39 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lrrfip1Q3UZ39 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms