Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC15.79■□□□□ 0.12
NUBP1P53384 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.79■□□□□ 0.12
NUBP1P53384 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 AC234644.1-201ENST00000406065 370 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 MTND4LP7-201ENST00000431728 294 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.79■□□□□ 0.12
NUBP1P53384 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.79■□□□□ 0.12
NUBP1P53384 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.79■□□□□ 0.12
NUBP1P53384 AC027176.2-201ENST00000559166 746 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 RN7SL555P-201ENST00000584742 339 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.79■□□□□ 0.12
NUBP1P53384 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 AL133406.3-201ENST00000606817 541 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 AC104763.3-201ENST00000613765 618 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 AC090116.1-201ENST00000615679 446 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.79■□□□□ 0.12
NUBP1P53384 AC091544.8-201ENST00000619490 361 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 AC011491.1-203ENST00000637688 543 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC15.79■□□□□ 0.12
NUBP1P53384 REXO1L8P-201ENST00000604378 1897 ntBASIC15.79■□□□□ 0.12
NUBP1P53384 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.79■□□□□ 0.12
NUBP1P53384 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.79■□□□□ 0.12
NUBP1P53384 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.79■□□□□ 0.12
NUBP1P53384 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUBP1P53384 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NUBP1P53384 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NUBP1P53384 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 AC096656.1-201ENST00000623826 1364 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 AC022417.1-201ENST00000624768 1303 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NUBP1P53384 AL512652.2-201ENST00000625156 1716 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NUBP1P53384 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
NUBP1P53384 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.78■□□□□ 0.12
NUBP1P53384 CNN2P10-201ENST00000443067 918 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 AC245100.5-201ENST00000452108 331 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 RN7SL11P-201ENST00000471305 293 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 HEXB-205ENST00000509579 806 ntTSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC15.78■□□□□ 0.12
NUBP1P53384 OR8X1P-201ENST00000534542 869 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC15.78■□□□□ 0.12
NUBP1P53384 AL161670.2-201ENST00000557650 1227 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC15.78■□□□□ 0.12
NUBP1P53384 RN7SL774P-201ENST00000577467 290 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 MIR3147-201ENST00000577811 66 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 AC078899.4-201ENST00000593952 1113 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
NUBP1P53384 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC15.78■□□□□ 0.12
NUBP1P53384 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC15.78■□□□□ 0.12
NUBP1P53384 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC15.78■□□□□ 0.12
NUBP1P53384 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.78■□□□□ 0.12
NUBP1P53384 AP003399.1-201ENST00000637534 361 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 MTND2P41-201ENST00000637599 773 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NUBP1P53384 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 AL354751.1-201ENST00000412768 1863 ntBASIC15.78■□□□□ 0.12
NUBP1P53384 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.78■□□□□ 0.12
NUBP1P53384 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUBP1P53384 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms