Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC3P19447 PKD1P5-201ENST00000532415 10291 ntBASIC18.26■□□□□ 0.51
ERCC3P19447 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ERCC3P19447 KRT8P22-201ENST00000562317 1415 ntBASIC18.26■□□□□ 0.51
ERCC3P19447 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC3P19447 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC3P19447 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC3P19447 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC3P19447 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC3P19447 AC104989.1-201ENST00000519711 778 ntBASIC18.26■□□□□ 0.51
ERCC3P19447 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC3P19447 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC3P19447 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ERCC3P19447 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.26■□□□□ 0.51
ERCC3P19447 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.26■□□□□ 0.51
ERCC3P19447 AC233724.13-201ENST00000598383 410 ntBASIC18.26■□□□□ 0.51
ERCC3P19447 AC133539.2-201ENST00000604757 467 ntBASIC18.26■□□□□ 0.51
ERCC3P19447 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC3P19447 CU634019.7-201ENST00000624153 1185 ntBASIC18.26■□□□□ 0.51
ERCC3P19447 FP236241.2-201ENST00000624906 1185 ntBASIC18.26■□□□□ 0.51
ERCC3P19447 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC3P19447 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC3P19447 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC3P19447 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC3P19447 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC3P19447 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC3P19447 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC3P19447 KRT43P-201ENST00000434019 910 ntBASIC18.25■□□□□ 0.51
ERCC3P19447 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC3P19447 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.25■□□□□ 0.51
ERCC3P19447 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC3P19447 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.25■□□□□ 0.51
ERCC3P19447 SLC25A47P1-201ENST00000531577 414 ntBASIC18.25■□□□□ 0.51
ERCC3P19447 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC3P19447 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC3P19447 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC3P19447 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC3P19447 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC3P19447 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC3P19447 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC3P19447 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ERCC3P19447 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC3P19447 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC3P19447 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC3P19447 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC3P19447 REXO1L6P-201ENST00000603433 1515 ntBASIC18.24■□□□□ 0.51
ERCC3P19447 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ERCC3P19447 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 AL162726.2-201ENST00000438986 1017 ntBASIC18.24■□□□□ 0.51
ERCC3P19447 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.24■□□□□ 0.51
ERCC3P19447 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC3P19447 BNIP3P42-201ENST00000454982 569 ntBASIC18.24■□□□□ 0.51
ERCC3P19447 FAM86LP-201ENST00000478302 853 ntBASIC18.24■□□□□ 0.51
ERCC3P19447 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.24■□□□□ 0.51
ERCC3P19447 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.24■□□□□ 0.51
ERCC3P19447 AL359711.2-201ENST00000563105 872 ntBASIC18.24■□□□□ 0.51
ERCC3P19447 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.24■□□□□ 0.51
ERCC3P19447 BNIP3P29-201ENST00000598302 571 ntBASIC18.24■□□□□ 0.51
ERCC3P19447 AC011447.5-201ENST00000616168 564 ntBASIC18.24■□□□□ 0.51
ERCC3P19447 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ERCC3P19447 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ERCC3P19447 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ERCC3P19447 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC3P19447 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms