Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 PRORSD1P-202ENST00000563365 2154 ntBASIC17.51■□□□□ 0.39
VTA1Q9NP79 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 AC132938.4-201ENST00000623835 848 ntBASIC17.51■□□□□ 0.39
VTA1Q9NP79 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 PCDHA12-202ENST00000613593 2588 ntBASIC17.51■□□□□ 0.39
VTA1Q9NP79 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.51■□□□□ 0.39
VTA1Q9NP79 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTA1Q9NP79 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 AC078819.1-201ENST00000547454 765 ntBASIC17.5■□□□□ 0.39
VTA1Q9NP79 AC012085.1-201ENST00000548270 765 ntBASIC17.5■□□□□ 0.39
VTA1Q9NP79 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 AC138951.2-201ENST00000623455 1161 ntBASIC17.5■□□□□ 0.39
VTA1Q9NP79 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VTA1Q9NP79 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTA1Q9NP79 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.49■□□□□ 0.39
VTA1Q9NP79 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTA1Q9NP79 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTA1Q9NP79 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.48■□□□□ 0.39
VTA1Q9NP79 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms