Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.39■□□□□ 0.85
ABCA3Q99758 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ABCA3Q99758 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC20.39■□□□□ 0.85
ABCA3Q99758 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC20.39■□□□□ 0.85
ABCA3Q99758 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.39■□□□□ 0.85
ABCA3Q99758 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC20.39■□□□□ 0.85
ABCA3Q99758 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC20.39■□□□□ 0.85
ABCA3Q99758 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.39■□□□□ 0.85
ABCA3Q99758 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC20.39■□□□□ 0.85
ABCA3Q99758 AC005962.1-201ENST00000584100 773 ntBASIC20.39■□□□□ 0.85
ABCA3Q99758 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.39■□□□□ 0.85
ABCA3Q99758 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC20.39■□□□□ 0.85
ABCA3Q99758 AC103691.2-201ENST00000618824 433 ntBASIC20.39■□□□□ 0.85
ABCA3Q99758 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.39■□□□□ 0.85
ABCA3Q99758 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ABCA3Q99758 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.38■□□□□ 0.85
ABCA3Q99758 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ABCA3Q99758 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.38■□□□□ 0.85
ABCA3Q99758 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ABCA3Q99758 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
ABCA3Q99758 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.38■□□□□ 0.85
ABCA3Q99758 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.38■□□□□ 0.85
ABCA3Q99758 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC20.38■□□□□ 0.85
ABCA3Q99758 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.38■□□□□ 0.85
ABCA3Q99758 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.38■□□□□ 0.85
ABCA3Q99758 AC138696.2-201ENST00000607376 223 ntBASIC20.38■□□□□ 0.85
ABCA3Q99758 AC007718.1-201ENST00000621078 280 ntBASIC20.38■□□□□ 0.85
ABCA3Q99758 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ABCA3Q99758 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ABCA3Q99758 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ABCA3Q99758 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.38■□□□□ 0.85
ABCA3Q99758 MBLAC2-202ENST00000514906 1936 ntBASIC20.38■□□□□ 0.85
ABCA3Q99758 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.37■□□□□ 0.85
ABCA3Q99758 AC011840.2-201ENST00000563063 1520 ntBASIC20.37■□□□□ 0.85
ABCA3Q99758 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.37■□□□□ 0.85
ABCA3Q99758 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ABCA3Q99758 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ABCA3Q99758 AC234644.1-201ENST00000406065 370 ntBASIC20.37■□□□□ 0.85
ABCA3Q99758 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.37■□□□□ 0.85
ABCA3Q99758 SNORD3B-2-202ENST00000571722 791 ntBASIC20.37■□□□□ 0.85
ABCA3Q99758 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC20.37■□□□□ 0.85
ABCA3Q99758 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.37■□□□□ 0.85
ABCA3Q99758 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC20.37■□□□□ 0.85
ABCA3Q99758 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ABCA3Q99758 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ABCA3Q99758 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ABCA3Q99758 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.37■□□□□ 0.85
ABCA3Q99758 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
ABCA3Q99758 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ABCA3Q99758 AC244394.1-201ENST00000435000 1665 ntBASIC20.37■□□□□ 0.85
ABCA3Q99758 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ABCA3Q99758 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ABCA3Q99758 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.37■□□□□ 0.85
ABCA3Q99758 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.37■□□□□ 0.85
ABCA3Q99758 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.37■□□□□ 0.85
ABCA3Q99758 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
ABCA3Q99758 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ABCA3Q99758 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC20.36■□□□□ 0.85
ABCA3Q99758 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.36■□□□□ 0.85
ABCA3Q99758 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ABCA3Q99758 AC104073.2-201ENST00000453737 312 ntBASIC20.36■□□□□ 0.85
ABCA3Q99758 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ABCA3Q99758 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.36■□□□□ 0.85
ABCA3Q99758 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ABCA3Q99758 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ABCA3Q99758 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
ABCA3Q99758 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ABCA3Q99758 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ABCA3Q99758 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.36■□□□□ 0.85
ABCA3Q99758 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ABCA3Q99758 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ABCA3Q99758 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.36■□□□□ 0.85
ABCA3Q99758 KRT18P36-201ENST00000411618 1276 ntBASIC20.36■□□□□ 0.85
ABCA3Q99758 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.36■□□□□ 0.85
ABCA3Q99758 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.36■□□□□ 0.85
ABCA3Q99758 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ABCA3Q99758 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.36■□□□□ 0.85
ABCA3Q99758 AC005357.2-202ENST00000590507 1060 ntBASIC20.36■□□□□ 0.85
ABCA3Q99758 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ABCA3Q99758 NAP1L6-202ENST00000641404 1222 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms