Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 AC093726.1-201ENST00000608064 963 ntBASIC18.51■□□□□ 0.55
STAG1Q8WVM7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 MIR8072-201ENST00000614241 80 ntBASIC18.51■□□□□ 0.55
STAG1Q8WVM7 AC020658.6-201ENST00000623564 1870 ntBASIC18.51■□□□□ 0.55
STAG1Q8WVM7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 AC090616.6-203ENST00000579186 1945 ntBASIC18.51■□□□□ 0.55
STAG1Q8WVM7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 CU639417.3-201ENST00000624240 1404 ntBASIC18.5■□□□□ 0.55
STAG1Q8WVM7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 AC098614.1-201ENST00000368528 745 ntBASIC18.5■□□□□ 0.55
STAG1Q8WVM7 AC098850.1-201ENST00000419919 790 ntBASIC18.5■□□□□ 0.55
STAG1Q8WVM7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 AC008494.3-201ENST00000606615 944 ntBASIC18.5■□□□□ 0.55
STAG1Q8WVM7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 AC008741.2-201ENST00000612792 3115 ntBASIC18.5■□□□□ 0.55
STAG1Q8WVM7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
STAG1Q8WVM7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.49■□□□□ 0.55
STAG1Q8WVM7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 FAM86LP-201ENST00000478302 853 ntBASIC18.49■□□□□ 0.55
STAG1Q8WVM7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 AC123567.1-201ENST00000548294 1261 ntBASIC18.49■□□□□ 0.55
STAG1Q8WVM7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.49■□□□□ 0.55
STAG1Q8WVM7 PAUPAR-201ENST00000630360 2965 ntBASIC18.48■□□□□ 0.55
STAG1Q8WVM7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
STAG1Q8WVM7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms