Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 SNORD3B-2-202ENST00000571722 791 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AC087045.2-201ENST00000606279 1003 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AC007881.3-201ENST00000608897 607 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AP001065.2-201ENST00000617205 644 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 Z98259.2-201ENST00000641583 609 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AC069224.1-201ENST00000566372 1715 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AC018695.7-201ENST00000624587 2492 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 RN7SL67P-201ENST00000492147 296 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 PGAM1P5-201ENST00000548011 764 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 AL136301.1-201ENST00000615830 422 ntBASIC21.8■■□□□ 1.08
UBR1Q8IWV7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
UBR1Q8IWV7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 AC009093.2-202ENST00000620513 2079 ntBASIC21.79■■□□□ 1.08
UBR1Q8IWV7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 HNRNPA1P41-201ENST00000397777 928 ntBASIC21.79■■□□□ 1.08
UBR1Q8IWV7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 NDUFS6P1-201ENST00000485187 316 ntBASIC21.79■■□□□ 1.08
UBR1Q8IWV7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 MIR3677-201ENST00000578964 60 ntBASIC21.79■■□□□ 1.08
UBR1Q8IWV7 RN7SL163P-201ENST00000583100 276 ntBASIC21.79■■□□□ 1.08
UBR1Q8IWV7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 AC092171.5-201ENST00000608012 942 ntBASIC21.79■■□□□ 1.08
UBR1Q8IWV7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 CAP2P1-201ENST00000557743 1390 ntBASIC21.79■■□□□ 1.08
UBR1Q8IWV7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBR1Q8IWV7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 E2F3P2-201ENST00000447755 1422 ntBASIC21.78■■□□□ 1.08
UBR1Q8IWV7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 AC242376.2-201ENST00000619355 883 ntBASIC21.78■■□□□ 1.08
UBR1Q8IWV7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBR1Q8IWV7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBR1Q8IWV7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms