Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 MIR648-201ENST00000385046 94 ntBASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 FO393414.2-201ENST00000405153 598 ntBASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 GNAQP1-201ENST00000444815 1067 ntBASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 SPTLC1P1-201ENST00000447199 261 ntBASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 SDHAP3-202ENST00000515467 728 ntBASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 AC004790.1-201ENST00000612686 536 ntBASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFWD3Q6PCD5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AL603832.2-201ENST00000566195 2125 ntBASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 EEF1DP4-201ENST00000446006 880 ntBASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AC025048.3-201ENST00000590609 569 ntBASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AC005702.4-201ENST00000618393 416 ntBASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AC004461.2-201ENST00000629517 803 ntBASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 AC018892.3-201ENST00000623986 2499 ntBASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 BTBD7P1-201ENST00000447253 1453 ntBASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.48■□□□□ 0.23
RFWD3Q6PCD5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AC114501.2-201ENST00000439631 535 ntBASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.47■□□□□ 0.23
RFWD3Q6PCD5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms