Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 AC091951.1-201ENST00000512854 2465 ntBASIC16.37■□□□□ 0.21
LRRC38Q5VT99 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.37■□□□□ 0.21
LRRC38Q5VT99 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AGAP7P-201ENST00000582299 2062 ntBASIC16.36■□□□□ 0.21
LRRC38Q5VT99 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AGAP14-201ENST00000624701 2060 ntBASIC16.36■□□□□ 0.21
LRRC38Q5VT99 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 CETN4P-206ENST00000642099 2168 ntBASIC16.36■□□□□ 0.21
LRRC38Q5VT99 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AC074338.1-201ENST00000416825 156 ntBASIC16.36■□□□□ 0.21
LRRC38Q5VT99 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 SERBP1P3-201ENST00000459980 809 ntBASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC38Q5VT99 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 MROH4P-201ENST00000431302 1578 ntBASIC16.35■□□□□ 0.21
LRRC38Q5VT99 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.35■□□□□ 0.21
LRRC38Q5VT99 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AC023824.1-201ENST00000562945 2975 ntBASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 AL589739.1-201ENST00000607720 493 ntBASIC16.35■□□□□ 0.21
LRRC38Q5VT99 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC38Q5VT99 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 FER1L4-210ENST00000615531 5998 ntBASIC16.34■□□□□ 0.21
LRRC38Q5VT99 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC38Q5VT99 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms