Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 Z97205.2-201ENST00000564697 1639 ntBASIC14.08□□□□□ -0.16
TRAF3IP2O43734 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAF3IP2O43734 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC136621.1-201ENST00000624017 2304 ntBASIC14.07□□□□□ -0.16
TRAF3IP2O43734 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AL645939.2-201ENST00000427340 991 ntBASIC14.07□□□□□ -0.16
TRAF3IP2O43734 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 DUX4L27-201ENST00000554796 1261 ntBASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AL844908.2-201ENST00000609461 460 ntBASIC14.07□□□□□ -0.16
TRAF3IP2O43734 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.07□□□□□ -0.16
TRAF3IP2O43734 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC092384.3-202ENST00000564646 2873 ntBASIC14.07□□□□□ -0.16
TRAF3IP2O43734 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAF3IP2O43734 AC100757.3-201ENST00000622361 1406 ntBASIC14.07□□□□□ -0.16
TRAF3IP2O43734 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAF3IP2O43734 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms