Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm15719-201ENSMUST00000120619 635 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Trbv27-201ENSMUST00000193711 277 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm37922-201ENSMUST00000195596 455 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm37497-201ENSMUST00000195830 798 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm19269-201ENSMUST00000211401 804 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 AC153544.1-201ENSMUST00000217988 400 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 AC116589.4-201ENSMUST00000222390 216 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retreg3Q9CQV4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retreg3Q9CQV4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Gm12384-201ENSMUST00000119228 919 ntBASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retreg3Q9CQV4 Gm24644-201ENSMUST00000157114 139 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms