Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.04■□□□□ -0
BBS4Q96RK4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.04■□□□□ -0
BBS4Q96RK4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.04■□□□□ -0
BBS4Q96RK4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.04■□□□□ -0
BBS4Q96RK4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.04■□□□□ -0
BBS4Q96RK4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.04■□□□□ -0
BBS4Q96RK4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.04■□□□□ -0
BBS4Q96RK4 AC026150.2-201ENST00000564693 1156 ntBASIC15.04■□□□□ -0
BBS4Q96RK4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 AL450472.2-201ENST00000603663 1156 ntBASIC15.04■□□□□ -0
BBS4Q96RK4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.04■□□□□ -0
BBS4Q96RK4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.04■□□□□ -0
BBS4Q96RK4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.03■□□□□ -0
BBS4Q96RK4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
BBS4Q96RK4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
BBS4Q96RK4 AC004967.1-201ENST00000453589 447 ntBASIC15.03■□□□□ -0
BBS4Q96RK4 PHKG1P2-201ENST00000457537 863 ntBASIC15.03■□□□□ -0
BBS4Q96RK4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.03■□□□□ -0
BBS4Q96RK4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 AL596442.2-201ENST00000610240 980 ntBASIC15.03■□□□□ -0
BBS4Q96RK4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 MIR6080-201ENST00000617359 66 ntBASIC15.03■□□□□ -0
BBS4Q96RK4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.03■□□□□ -0
BBS4Q96RK4 AC134684.3-201ENST00000641758 218 ntBASIC15.03■□□□□ -0
BBS4Q96RK4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.03■□□□□ -0
BBS4Q96RK4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.03■□□□□ -0
BBS4Q96RK4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BBS4Q96RK4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.02■□□□□ -0
BBS4Q96RK4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
BBS4Q96RK4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
BBS4Q96RK4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.02■□□□□ -0
BBS4Q96RK4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.02■□□□□ -0
BBS4Q96RK4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BBS4Q96RK4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.02■□□□□ -0
BBS4Q96RK4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.02■□□□□ -0
BBS4Q96RK4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.02■□□□□ -0
BBS4Q96RK4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.02■□□□□ -0
BBS4Q96RK4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.02■□□□□ -0
BBS4Q96RK4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.02■□□□□ -0
BBS4Q96RK4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
BBS4Q96RK4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 GPS2P2-201ENST00000430745 888 ntBASIC15.02■□□□□ -0
BBS4Q96RK4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.02■□□□□ -0
BBS4Q96RK4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 MTND6P24-201ENST00000440466 518 ntBASIC15.02■□□□□ -0
BBS4Q96RK4 SPDYE14P-201ENST00000442619 822 ntBASIC15.02■□□□□ -0
BBS4Q96RK4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.02■□□□□ -0
BBS4Q96RK4 AP006288.1-201ENST00000446065 395 ntBASIC15.02■□□□□ -0
BBS4Q96RK4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.02■□□□□ -0
BBS4Q96RK4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BBS4Q96RK4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
BBS4Q96RK4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.02■□□□□ -0
BBS4Q96RK4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.02■□□□□ -0
BBS4Q96RK4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
BBS4Q96RK4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms