Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
UBE2D3P61077 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
UBE2D3P61077 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.32□□□□□ -0.6
UBE2D3P61077 GPX1P2-201ENST00000429271 606 ntBASIC11.32□□□□□ -0.6
UBE2D3P61077 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 RPL13AP23-201ENST00000480739 586 ntBASIC11.32□□□□□ -0.6
UBE2D3P61077 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2D3P61077 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.32□□□□□ -0.6
UBE2D3P61077 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2D3P61077 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.32□□□□□ -0.6
UBE2D3P61077 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2D3P61077 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2D3P61077 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2D3P61077 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
UBE2D3P61077 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2D3P61077 AC020658.6-201ENST00000623564 1870 ntBASIC11.32□□□□□ -0.6
UBE2D3P61077 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2D3P61077 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 AC041040.2-201ENST00000622926 2899 ntBASIC11.31□□□□□ -0.6
UBE2D3P61077 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D3P61077 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2D3P61077 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.31□□□□□ -0.6
UBE2D3P61077 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.31□□□□□ -0.6
UBE2D3P61077 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 AC098859.1-201ENST00000502915 1238 ntBASIC11.31□□□□□ -0.6
UBE2D3P61077 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
UBE2D3P61077 RARRES2P8-201ENST00000566335 367 ntBASIC11.31□□□□□ -0.6
UBE2D3P61077 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.31□□□□□ -0.6
UBE2D3P61077 AP002472.1-201ENST00000577490 586 ntBASIC11.31□□□□□ -0.6
UBE2D3P61077 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2D3P61077 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 AC073389.1-201ENST00000595595 795 ntBASIC11.31□□□□□ -0.6
UBE2D3P61077 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.31□□□□□ -0.6
UBE2D3P61077 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 AC079781.5-202ENST00000641784 3743 ntBASIC11.31□□□□□ -0.6
UBE2D3P61077 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2D3P61077 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.31□□□□□ -0.6
UBE2D3P61077 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2D3P61077 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.31□□□□□ -0.6
UBE2D3P61077 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
UBE2D3P61077 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms