Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 TPM3P8-201ENST00000330554 643 ntBASIC16.57■□□□□ 0.24
RB1P06400 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RB1P06400 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 AL590640.2-201ENST00000457038 527 ntBASIC16.57■□□□□ 0.24
RB1P06400 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 AC126915.1-201ENST00000522847 1038 ntBASIC16.57■□□□□ 0.24
RB1P06400 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.57■□□□□ 0.24
RB1P06400 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.57■□□□□ 0.24
RB1P06400 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.57■□□□□ 0.24
RB1P06400 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.57■□□□□ 0.24
RB1P06400 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
RB1P06400 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.57■□□□□ 0.24
RB1P06400 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.57■□□□□ 0.24
RB1P06400 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RB1P06400 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RB1P06400 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.56■□□□□ 0.24
RB1P06400 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.56■□□□□ 0.24
RB1P06400 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.56■□□□□ 0.24
RB1P06400 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.56■□□□□ 0.24
RB1P06400 CNN2P10-201ENST00000443067 918 ntBASIC16.56■□□□□ 0.24
RB1P06400 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RB1P06400 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.56■□□□□ 0.24
RB1P06400 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.56■□□□□ 0.24
RB1P06400 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.56■□□□□ 0.24
RB1P06400 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RB1P06400 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RB1P06400 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.56■□□□□ 0.24
RB1P06400 UBALD1-205ENST00000590891 2641 ntBASIC16.56■□□□□ 0.24
RB1P06400 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.56■□□□□ 0.24
RB1P06400 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.56■□□□□ 0.24
RB1P06400 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RB1P06400 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RB1P06400 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RB1P06400 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.55■□□□□ 0.24
RB1P06400 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RB1P06400 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.55■□□□□ 0.24
RB1P06400 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RB1P06400 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms