Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.76■□□□□ 0.11
CAPNS1P04632 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.76■□□□□ 0.11
CAPNS1P04632 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPNS1P04632 AL583810.1-201ENST00000553344 1045 ntBASIC15.76■□□□□ 0.11
CAPNS1P04632 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPNS1P04632 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.76■□□□□ 0.11
CAPNS1P04632 AC013467.2-201ENST00000605472 835 ntBASIC15.76■□□□□ 0.11
CAPNS1P04632 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CAPNS1P04632 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
CAPNS1P04632 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 AL353732.1-201ENST00000569618 1459 ntBASIC15.76■□□□□ 0.11
CAPNS1P04632 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 TCAF2P1-201ENST00000291129 2421 ntBASIC15.76■□□□□ 0.11
CAPNS1P04632 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CAPNS1P04632 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CAPNS1P04632 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 AC020907.1-201ENST00000616460 1350 ntBASIC15.75■□□□□ 0.11
CAPNS1P04632 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CAPNS1P04632 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 CETN4P-206ENST00000642099 2168 ntBASIC15.75■□□□□ 0.11
CAPNS1P04632 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 AC092506.1-202ENST00000401022 528 ntBASIC15.75■□□□□ 0.11
CAPNS1P04632 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.75■□□□□ 0.11
CAPNS1P04632 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 DOC2GP-202ENST00000514950 1163 ntBASIC15.75■□□□□ 0.11
CAPNS1P04632 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.75■□□□□ 0.11
CAPNS1P04632 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 RN7SL828P-201ENST00000607615 303 ntBASIC15.75■□□□□ 0.11
CAPNS1P04632 AC007431.3-201ENST00000623221 587 ntBASIC15.75■□□□□ 0.11
CAPNS1P04632 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.75■□□□□ 0.11
CAPNS1P04632 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.75■□□□□ 0.11
CAPNS1P04632 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CAPNS1P04632 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CAPNS1P04632 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPNS1P04632 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
CAPNS1P04632 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPNS1P04632 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPNS1P04632 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CAPNS1P04632 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPNS1P04632 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.74■□□□□ 0.11
CAPNS1P04632 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.74■□□□□ 0.11
CAPNS1P04632 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms