Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 ACTG1P2-201ENST00000415776 1125 ntBASIC17.77■□□□□ 0.44
ALDH1A1P00352 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 ACTG1P11-201ENST00000425411 1125 ntBASIC17.77■□□□□ 0.44
ALDH1A1P00352 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 AC073413.1-201ENST00000603927 732 ntBASIC17.77■□□□□ 0.44
ALDH1A1P00352 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALDH1A1P00352 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
ALDH1A1P00352 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALDH1A1P00352 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ALDH1A1P00352 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALDH1A1P00352 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALDH1A1P00352 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ALDH1A1P00352 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ALDH1A1P00352 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 AC026316.1-201ENST00000398900 414 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 AL139094.1-201ENST00000405549 1188 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 NOC2LP1-201ENST00000450578 752 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 TUBB8P8-201ENST00000458717 1058 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 AC019193.1-201ENST00000506678 823 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 BNIP3P13-201ENST00000599968 566 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 OR10B1P-201ENST00000601666 907 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 AC073352.2-201ENST00000609385 439 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 RN7SL736P-201ENST00000613111 269 ntBASIC17.76■□□□□ 0.43
ALDH1A1P00352 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
ALDH1A1P00352 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALDH1A1P00352 KRT8P4-201ENST00000509735 1454 ntBASIC17.75■□□□□ 0.43
ALDH1A1P00352 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 CHMP1AP1-201ENST00000445563 662 ntBASIC17.75■□□□□ 0.43
ALDH1A1P00352 HIST2H2BB-201ENST00000449108 381 ntBASIC17.75■□□□□ 0.43
ALDH1A1P00352 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 AC100850.1-201ENST00000506768 649 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms