Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 AC000095.1-201ENST00000603208 874 ntBASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5RAP1Q96SZ6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 PCDHB19P-201ENST00000570871 2371 ntBASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 CLK3P2-201ENST00000427566 1453 ntBASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 DGCR5-201ENST00000399539 862 ntBASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AC005034.1-201ENST00000426657 489 ntBASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 FAM86LP-201ENST00000478302 853 ntBASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 AC024909.3-201ENST00000611513 2257 ntBASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 KRT17P7-201ENST00000451704 1104 ntBASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 RN7SL752P-201ENST00000463779 287 ntBASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 ELK1P1-201ENST00000485699 580 ntBASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 AC092552.1-201ENST00000547243 906 ntBASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 AL035252.4-201ENST00000624174 288 ntBASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDK5RAP1Q96SZ6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 AL121723.1-201ENST00000445194 1519 ntBASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms