Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC26.95■■□□□ 1.91
TRIM41Q8WV44 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 ATP6V0CP2-201ENST00000469409 207 ntBASIC26.95■■□□□ 1.9
TRIM41Q8WV44 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 PCDHB19P-201ENST00000570871 2371 ntBASIC26.95■■□□□ 1.9
TRIM41Q8WV44 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRIM41Q8WV44 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 GZMB-202ENST00000382540 816 ntTSL 5 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AC074338.1-201ENST00000416825 156 ntBASIC26.94■■□□□ 1.9
TRIM41Q8WV44 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 BCRP2-202ENST00000447763 634 ntBASIC26.94■■□□□ 1.9
TRIM41Q8WV44 BCRP6-201ENST00000510112 632 ntBASIC26.94■■□□□ 1.9
TRIM41Q8WV44 BCRP7-201ENST00000511549 544 ntBASIC26.94■■□□□ 1.9
TRIM41Q8WV44 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AC018635.2-201ENST00000608625 364 ntBASIC26.94■■□□□ 1.9
TRIM41Q8WV44 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC26.94■■□□□ 1.9
TRIM41Q8WV44 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 FTH1-202ENST00000526640 786 ntTSL 2 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 LINC01115-203ENST00000606068 577 ntBASIC26.93■■□□□ 1.9
TRIM41Q8WV44 AC097724.1-201ENST00000609581 426 ntBASIC26.93■■□□□ 1.9
TRIM41Q8WV44 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 AC138627.1-207ENST00000641560 1006 ntBASIC26.93■■□□□ 1.9
TRIM41Q8WV44 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 GRN-214ENST00000589265 1632 ntTSL 5 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM41Q8WV44 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 AC018892.3-201ENST00000623986 2499 ntBASIC26.92■■□□□ 1.9
TRIM41Q8WV44 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 FAM86HP-204ENST00000513466 959 ntBASIC26.92■■□□□ 1.9
TRIM41Q8WV44 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM41Q8WV44 AC092337.1-201ENST00000568699 1129 ntBASIC26.92■■□□□ 1.9
TRIM41Q8WV44 AC005357.2-202ENST00000590507 1060 ntBASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms