Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 RPL13AP23-201ENST00000480739 586 ntBASIC15.99■□□□□ 0.15
RAPH1Q70E73 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 AC092127.1-201ENST00000567093 3455 ntBASIC15.99■□□□□ 0.15
RAPH1Q70E73 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 AC023157.3-201ENST00000619086 2088 ntBASIC15.98■□□□□ 0.15
RAPH1Q70E73 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 GPX1P2-201ENST00000429271 606 ntBASIC15.98■□□□□ 0.15
RAPH1Q70E73 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 AC112191.1-201ENST00000523689 701 ntBASIC15.98■□□□□ 0.15
RAPH1Q70E73 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 PDPK2P-202ENST00000562415 1191 ntBASIC15.98■□□□□ 0.15
RAPH1Q70E73 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAPH1Q70E73 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.98■□□□□ 0.15
RAPH1Q70E73 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.98■□□□□ 0.15
RAPH1Q70E73 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AP002472.1-201ENST00000577490 586 ntBASIC15.97■□□□□ 0.15
RAPH1Q70E73 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AL513190.1-201ENST00000621254 727 ntBASIC15.97■□□□□ 0.15
RAPH1Q70E73 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms