Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.14□□□□□ -0.15
SRP9P49458 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SRP9P49458 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
SRP9P49458 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.13□□□□□ -0.15
SRP9P49458 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SRP9P49458 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.13□□□□□ -0.15
SRP9P49458 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SRP9P49458 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.13□□□□□ -0.15
SRP9P49458 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 AC091951.1-201ENST00000512854 2465 ntBASIC14.13□□□□□ -0.15
SRP9P49458 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.13□□□□□ -0.15
SRP9P49458 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 FAM58CP-201ENST00000435741 640 ntBASIC14.13□□□□□ -0.15
SRP9P49458 MKNK2P1-201ENST00000437526 628 ntBASIC14.13□□□□□ -0.15
SRP9P49458 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.13□□□□□ -0.15
SRP9P49458 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SRP9P49458 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.13□□□□□ -0.15
SRP9P49458 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.13□□□□□ -0.15
SRP9P49458 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.13□□□□□ -0.15
SRP9P49458 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.13□□□□□ -0.15
SRP9P49458 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SRP9P49458 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SRP9P49458 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SRP9P49458 C8orf49-201ENST00000525043 1968 ntBASIC14.13□□□□□ -0.15
SRP9P49458 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 AC092919.2-201ENST00000623631 1645 ntBASIC14.12□□□□□ -0.15
SRP9P49458 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.12□□□□□ -0.15
SRP9P49458 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 LINC00528-201ENST00000600723 2160 ntBASIC14.12□□□□□ -0.15
SRP9P49458 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SRP9P49458 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.12□□□□□ -0.15
SRP9P49458 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.12□□□□□ -0.15
SRP9P49458 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.12□□□□□ -0.15
SRP9P49458 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SRP9P49458 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 AC092474.2-201ENST00000424288 719 ntBASIC14.12□□□□□ -0.15
SRP9P49458 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.12□□□□□ -0.15
SRP9P49458 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 AC005829.1-201ENST00000570002 483 ntBASIC14.12□□□□□ -0.15
SRP9P49458 AC020765.3-201ENST00000613051 740 ntBASIC14.12□□□□□ -0.15
SRP9P49458 AC091812.2-201ENST00000619081 385 ntBASIC14.12□□□□□ -0.15
SRP9P49458 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SRP9P49458 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SRP9P49458 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SRP9P49458 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.12□□□□□ -0.15
SRP9P49458 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms