Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 RNU1-114P-201ENST00000365297 166 ntBASIC19.29■□□□□ 0.68
PDE6BP35913 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PDE6BP35913 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 HINT2P1-201ENST00000419438 481 ntBASIC19.29■□□□□ 0.68
PDE6BP35913 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6BP35913 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.29■□□□□ 0.68
PDE6BP35913 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PDE6BP35913 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.29■□□□□ 0.68
PDE6BP35913 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.29■□□□□ 0.68
PDE6BP35913 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.29■□□□□ 0.68
PDE6BP35913 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDE6BP35913 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDE6BP35913 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
PDE6BP35913 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6BP35913 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE6BP35913 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6BP35913 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.28■□□□□ 0.68
PDE6BP35913 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE6BP35913 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.28■□□□□ 0.68
PDE6BP35913 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6BP35913 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE6BP35913 CHMP4BP1-201ENST00000556017 588 ntBASIC19.28■□□□□ 0.68
PDE6BP35913 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.28■□□□□ 0.68
PDE6BP35913 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE6BP35913 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE6BP35913 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE6BP35913 MIR6727-201ENST00000620702 65 ntBASIC19.28■□□□□ 0.68
PDE6BP35913 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE6BP35913 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDE6BP35913 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.28■□□□□ 0.68
PDE6BP35913 AL023775.1-201ENST00000454907 1746 ntBASIC19.28■□□□□ 0.68
PDE6BP35913 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.28■□□□□ 0.68
PDE6BP35913 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDE6BP35913 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.28■□□□□ 0.68
PDE6BP35913 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE6BP35913 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE6BP35913 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE6BP35913 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDE6BP35913 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDE6BP35913 FXNP2-201ENST00000411625 547 ntBASIC19.27■□□□□ 0.68
PDE6BP35913 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE6BP35913 AC079178.1-201ENST00000420915 656 ntBASIC19.27■□□□□ 0.68
PDE6BP35913 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE6BP35913 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE6BP35913 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.27■□□□□ 0.68
PDE6BP35913 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE6BP35913 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.27■□□□□ 0.68
PDE6BP35913 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE6BP35913 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDE6BP35913 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PDE6BP35913 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDE6BP35913 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDE6BP35913 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.27■□□□□ 0.68
PDE6BP35913 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms