Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.38■□□□□ 0.37
KRT9P35527 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
KRT9P35527 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
KRT9P35527 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT9P35527 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.37■□□□□ 0.37
KRT9P35527 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT9P35527 ACTG1P14-201ENST00000446382 1122 ntBASIC17.37■□□□□ 0.37
KRT9P35527 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 AL138918.1-201ENST00000568306 659 ntBASIC17.37■□□□□ 0.37
KRT9P35527 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT9P35527 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KRT9P35527 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
KRT9P35527 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
KRT9P35527 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT9P35527 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT9P35527 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KRT9P35527 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 HTR5BP-201ENST00000430851 1154 ntBASIC17.36■□□□□ 0.37
KRT9P35527 SPDYE11-202ENST00000450699 704 ntBASIC17.36■□□□□ 0.37
KRT9P35527 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 RN7SL589P-201ENST00000481268 310 ntBASIC17.36■□□□□ 0.37
KRT9P35527 SPDYE9P-201ENST00000570642 692 ntBASIC17.36■□□□□ 0.37
KRT9P35527 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.36■□□□□ 0.37
KRT9P35527 SPDYE10P-202ENST00000612005 668 ntBASIC17.36■□□□□ 0.37
KRT9P35527 SPDYE8P-202ENST00000612377 668 ntBASIC17.36■□□□□ 0.37
KRT9P35527 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT9P35527 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.36■□□□□ 0.37
KRT9P35527 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KRT9P35527 AC106881.1-201ENST00000605849 3329 ntBASIC17.36■□□□□ 0.37
KRT9P35527 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
KRT9P35527 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT9P35527 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT9P35527 FAM45BP-202ENST00000592932 1624 ntBASIC17.36■□□□□ 0.37
KRT9P35527 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT9P35527 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
KRT9P35527 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms