Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RN7SL555P-201ENST00000584742 339 ntBASIC19■□□□□ 0.63
LMNB1P20700 AC026740.1-201ENST00000607068 791 ntBASIC19■□□□□ 0.63
LMNB1P20700 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19■□□□□ 0.63
LMNB1P20700 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19■□□□□ 0.63
LMNB1P20700 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19■□□□□ 0.63
LMNB1P20700 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 REXO1L1P-202ENST00000608646 1974 ntBASIC19■□□□□ 0.63
LMNB1P20700 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19■□□□□ 0.63
LMNB1P20700 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19■□□□□ 0.63
LMNB1P20700 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
LMNB1P20700 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19■□□□□ 0.63
LMNB1P20700 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMNB1P20700 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.99■□□□□ 0.63
LMNB1P20700 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LMNB1P20700 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.99■□□□□ 0.63
LMNB1P20700 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LMNB1P20700 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LMNB1P20700 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 ACTBP8-201ENST00000403258 1108 ntBASIC18.99■□□□□ 0.63
LMNB1P20700 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.99■□□□□ 0.63
LMNB1P20700 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.99■□□□□ 0.63
LMNB1P20700 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.99■□□□□ 0.63
LMNB1P20700 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LMNB1P20700 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 AC024681.1-201ENST00000521917 487 ntBASIC18.99■□□□□ 0.63
LMNB1P20700 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.99■□□□□ 0.63
LMNB1P20700 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.99■□□□□ 0.63
LMNB1P20700 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.99■□□□□ 0.63
LMNB1P20700 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.99■□□□□ 0.63
LMNB1P20700 AC097359.3-201ENST00000603982 1210 ntBASIC18.99■□□□□ 0.63
LMNB1P20700 HLA-C-210ENST00000640219 976 ntBASIC18.99■□□□□ 0.63
LMNB1P20700 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.99■□□□□ 0.63
LMNB1P20700 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LMNB1P20700 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNB1P20700 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.99■□□□□ 0.63
LMNB1P20700 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LMNB1P20700 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LMNB1P20700 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.98■□□□□ 0.63
LMNB1P20700 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.98■□□□□ 0.63
LMNB1P20700 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 AC007274.2-201ENST00000421675 662 ntBASIC18.98■□□□□ 0.63
LMNB1P20700 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.98■□□□□ 0.63
LMNB1P20700 NUP210P1-202ENST00000504322 710 ntBASIC18.98■□□□□ 0.63
LMNB1P20700 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.98■□□□□ 0.63
LMNB1P20700 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
LMNB1P20700 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 MIR3147-201ENST00000577811 66 ntBASIC18.98■□□□□ 0.63
LMNB1P20700 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LMNB1P20700 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.98■□□□□ 0.63
LMNB1P20700 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LMNB1P20700 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.98■□□□□ 0.63
LMNB1P20700 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LMNB1P20700 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.97■□□□□ 0.63
LMNB1P20700 AP001282.1-201ENST00000531301 1499 ntBASIC18.97■□□□□ 0.63
LMNB1P20700 AC008132.1-202ENST00000342005 1389 ntBASIC18.97■□□□□ 0.63
LMNB1P20700 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LMNB1P20700 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.97■□□□□ 0.63
LMNB1P20700 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LMNB1P20700 AL133267.1-201ENST00000398220 340 ntBASIC18.97■□□□□ 0.63
LMNB1P20700 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.97■□□□□ 0.63
LMNB1P20700 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms