Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 AC073389.1-201ENST00000595595 795 ntBASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 AC011477.6-201ENST00000604980 1927 ntBASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RHBDD3Q9Y3P4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AC004832.2-201ENST00000426397 482 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AP000347.1-202ENST00000435868 847 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AC105233.2-201ENST00000523697 349 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AF228730.5-201ENST00000530288 346 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AC027307.2-201ENST00000591252 911 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 MIR4321-201ENST00000592276 80 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 AL671883.3-201ENST00000603274 991 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 C20orf181-201ENST00000623918 480 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 OR2I1P-210ENST00000642037 4691 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 CICP13-201ENST00000422015 2789 ntBASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RHBDD3Q9Y3P4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RHBDD3Q9Y3P4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms