Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CSMD1Q96PZ7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 ALOX12P2-203ENST00000570921 1945 ntBASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 AC007274.2-201ENST00000421675 662 ntBASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 FO393414.2-201ENST00000405153 598 ntBASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 KRT8P35-201ENST00000483942 1338 ntBASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 AL354989.2-201ENST00000435838 1540 ntBASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 AC106794.1-201ENST00000506935 792 ntBASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD1Q96PZ7 REXO1L1P-202ENST00000608646 1974 ntBASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 AC022748.3-201ENST00000621828 275 ntBASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 AC027139.1-201ENST00000565286 951 ntBASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 RN7SL713P-201ENST00000582127 302 ntBASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 AL512430.1-201ENST00000392575 860 ntBASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 FGFR3P1-201ENST00000449999 601 ntBASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD1Q96PZ7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSMD1Q96PZ7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms